Making homemade High Protein Bagels used to mean settling for dry, dense pucks of sadness or dealing with complicated yeast starters. Not anymore. By combining self-rising flour with creamy blended cottage cheese, we create a magic dough that requires no yeast bagels methods and zero boiling.
These bagels are fluffy, golden, and ready in less than 30 minutes, proving that a healthy bagel recipe can actually taste amazing.

These aren’t just empty carbs. By swapping the usual water and oil for cottage cheese, we infuse the dough with slow-digesting protein, making them a macro-friendly staple. Plus, I’m sharing my secret “Everything Bagel” topping hack to get you started!
This easy dough recipe is a star member of my High Protein Cottage Cheese Recipes collection. If you love this dough, you have to try the flat version: my viral Cottage Cheese Flatbread.
Table of Contents
Are High-Protein Bagels Good For You? (The Science)
Bagels often get a bad rap in the diet world as “empty calorie bombs.” A standard bakery bagel can pack over 50g of refined carbs with very little nutritional payback. These High Protein Bagels change the narrative entirely, offering a balanced way to add protein to a bagel without relying on highly processed powders.

Which bagels are high in protein?
Store-bought “protein bagels” usually rely on added wheat gluten or soy protein isolate to boost the numbers, often resulting in a rubbery, chewy texture that feels artificial. These homemade cottage cheese bagels provide 12-14g of complete protein per bagel naturally, thanks to the dairy base. The protein comes from casein and whey found in the cheese, which are highly bioavailable and easily absorbed by the body.
Are bagels ok for losing weight?
Yes! The problem with regular bagels is the massive blood sugar spike and subsequent crash that leaves you hungry an hour later. The protein in these 2 ingredient bagels helps stabilize blood sugar by slowing down digestion. They are lower in calories (~160 vs. 300+) and provide a high satiety factor, meaning you stay full longer on fewer calories.
The Glycemic Advantage
When you pair carbohydrates with protein (like in this dough), you lower the overall glycemic load of the meal. This prevents the sharp insulin spike associated with white flour products. It transforms a “cheat meal” into a functional fuel source.
Why do bodybuilders eat bagels?
Bodybuilders have long loved bagels for easy post-workout carbs to replenish glycogen stores. This version is even better because it adds a hit of Casein protein from the cottage cheese, which aids in muscle recovery over a longer period. It essentially turns a “carb cheat” into a functional recovery meal.
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2-Ingredient High Protein Bagels
- Total Time: 25 mins
- Yield: 4 Bagels 1x
Description
These 2-Ingredient High Protein Bagels are a game changer. Made with a simple dough of blended cottage cheese and self-rising flour, they are yeast-free, no-boil, and pack 12g of protein each.
Ingredients
- 1 cup Self-Rising Flour (plus extra for dusting)
- 1 cup Full Fat Cottage Cheese (blended smooth)
- 1 Egg (for egg wash, optional)
- 2 tbsp Everything Bagel Seasoning (or sesame/poppy seeds)
Instructions
- Prep: Preheat your oven to 375°F (190°C) or Air Fryer to 350°F (175°C). Line a baking sheet with parchment paper.
- Blend: Place cottage cheese in a blender or food processor. Blend on high until completely smooth and creamy.
- Mix: In a medium bowl, combine the flour and blended cottage cheese. Stir with a spatula until a shaggy dough forms.
- Knead: Use clean hands to knead the dough in the bowl for 1-2 minutes until it forms a smooth, tacky ball. If it’s too sticky, add a sprinkle more flour.
- Shape: Divide dough into 4 equal balls. Poke a hole in the center of each ball with your thumb and stretch it out to form a bagel shape. Place on the prepared baking sheet.
- Top: Whisk the egg in a small bowl. Brush the tops of the bagels with egg wash and sprinkle generously with seasoning.
- Bake: Oven: Bake for 20-25 minutes until puffed and golden brown. Air Fryer: Cook for 10-12 minutes until golden.
- Cool: Let cool for at least 10 minutes before slicing to allow the interior to set.
Notes
- Self-Rising Flour Substitute: Mix 1 cup All-Purpose Flour + 1.5 tsp Baking Powder + 1/2 tsp Salt.
- Storage: Store in an airtight container at room temp for 2 days, or refrigerator for 5 days.
- Freezing: Slice completely, then freeze. Toast directly from frozen.
- Prep Time: 5 mins
- Cook Time: 20 mins
- Category: Breakfast
- Method: Baked/Air Fryer
- Cuisine: American
Nutrition
- Serving Size: 1 Bagel
- Calories: 160
- Sugar: 1g
- Sodium: 420mg
- Fat: 2g
- Saturated Fat: 1g
- Carbohydrates: 24g
- Fiber: 1g
- Protein: 12g
- Cholesterol: 45mg
How to Add Protein to a Bagel (Ingredients)
To make these no yeast bagels, we rely on a specific chemical reaction between the dairy and the flour. It sounds like magic, but it is just science.

1. Self-Rising Flour: The Structure
This is the magic ingredient that makes them rise without yeast. It contains baking powder and salt already mixed in at the perfect ratio. If you don’t have it, you can make your own (see FAQs), but the store-bought version guarantees a consistent rise every time. It provides the structure and the fluffiness that makes this a truly healthy bagel recipe.
2. Full Fat Cottage Cheese: The Protein Powerhouse
We blend this to create a creamy liquid base that replaces the water, oil, and eggs found in traditional dough.
- Why Blend? Blending is non-negotiable. It eliminates the curds, ensuring you don’t have “cheesy” spots in your bread. It creates a smooth emulsion that hydrates the flour evenly. I use this same blending technique for my High Protein Edible Cookie Dough to create a smooth, creamy texture.
- Why Full Fat? Using 4% milkfat cottage cheese ensures the bagels are tender. Fat-free versions have higher water content, which evaporates during baking and can leave you with a tough, rubbery bagel.
What gives bagels so much protein?
In traditional recipes, the small amount of protein comes solely from the wheat flour. In this recipe, the concentrated milk protein from the cottage cheese doubles the protein count without adding protein powder, which can dry out baked goods. This is the simplest way to add protein to a bagel without altering the flavor profile.
Can I use Greek Yogurt instead?
You can (this is often called the “Skinnytaste” bagel), but I find cottage cheese bagels create a fluffier, less sour dough. Yogurt can sometimes leave a tangy, acidic aftertaste that clashes with savory toppings, whereas cottage cheese is more neutral and savory, mimicking a traditional yeast dough flavor better.
Texture & Flavor Profile (What to Expect)
If you are used to New York style boiled bagels, you might be skeptical. Here is the honest breakdown of what these 2 ingredient bagels taste like.
- The Crust: Because we egg wash them, they develop a beautiful golden-brown, slightly crisp exterior.
- The Crumb: The interior is soft, airy, and moist—closer to a really good biscuit or a soft pretzel than a dense, chewy boiled bagel.
- The Taste: They do not taste like cheese. The baking process neutralizes the tang of the dairy. They taste like a savory, white bread.
- The Chew: They lack the extreme “pull” of a gluten-heavy yeast bagel, making them easier to chew and digest.
How to Make High Protein Bagels (Step-by-Step)
This process is incredibly fast. From bowl to mouth in about 20 minutes. It is the easiest 2 ingredient bagels recipe you will ever try.
Step 1: The Blend
Place your cottage cheese in a blender or food processor. Blend on high until it is completely smooth and looks like heavy cream. No chunks allowed! This liquid is what hydrates the flour. If you leave chunks, your dough will be wet in some spots and dry in others.
Step 2: The Mix

Pour the blended cheese into a bowl with the self-rising flour. Stir with a spatula until combined. It will look crumbly at first—this is normal. Use your clean hands to knead it in the bowl for about a minute until it forms a tacky, cohesive ball. The warmth of your hands helps the flour absorb the moisture.
Step 3: The Shape

Divide the dough ball into 4 equal sections. You can roll them into ropes and pinch the ends, but the easier method is the “poke and stretch.” Roll each section into a ball, poke your thumb through the center, and gently stretch it out to look like a donut. Make the hole slightly larger than you think, as it will shrink when the bagel puffs up.
Step 4: The Bake (Air Fryer vs Oven)
Brush the tops with egg wash (for color and shine) and sprinkle generously with Everything Bagel Seasoning.
- Air Fryer Method: Cook at 350°F (175°C) for 10-12 minutes. This yields a crispy, bubbled exterior and a soft interior, very similar to a bakery bagel.
- Oven Method: Bake at 375°F (190°C) on a parchment-lined sheet for 20-22 minutes until golden brown. The oven method creates a softer, more uniform bagel.
Troubleshooting Common Mistakes
Even with just two ingredients, things can go wrong. Here is how to fix your cottage cheese bagels.
Why is my dough too sticky?
This is the most common issue. Cottage cheese brands vary in moisture content. If your dough sticks to your hands like glue, don’t panic.
- The Fix: Sprinkle in extra flour, one teaspoon at a time, kneading between additions. You want the dough to be “tacky” (like a post-it note) but not sticky. Wetting your hands with a little oil before shaping also helps.
Why didn’t my bagels rise?
If your bagels come out flat or dense, your leavening agent failed.
- The Fix: Check the expiration date on your self-rising flour. If it’s old, the baking powder inside has lost its potency. Also, ensure you didn’t over-knead the dough, which can knock out the air bubbles.
Why do they taste metallic?
This happens if there is too much baking powder relative to the acid in the cheese.
- The Fix: Ensure you are measuring your flour correctly (spoon and level, don’t scoop). If you made your own self-rising flour, be precise with the baking powder ratio.
Variations & Serving Ideas
These cottage cheese bagels are a blank canvas for your meal prep. You can customize the dough itself or the toppings.
The Savory Breakfast Sandwich

Slice a bagel in half and toast it until crisp. Fill it with fluffy egg whites, turkey bacon, and a slice of sharp cheddar. This creates a high-volume, filling breakfast sandwich that rivals any drive-thru. Pair this with my High Protein Breakfast Ideas for a full meal prep plan.
The Sweet Cinnamon Bagel
Add 1 teaspoon of cinnamon and 1 tablespoon of sweetener (like maple syrup or brown sugar substitute) directly to the dough. Top with cinnamon sugar before baking. Spread some of my High Protein Dunkaroo Dip on a toasted cinnamon bagel for a high-protein dessert breakfast that tastes like frosting.
The Lunch Bagel

These hold up well to heavy fillings and won’t get soggy. Use it for a turkey club sandwich or fill this bagel with my Slow Cooker Shredded BBQ Chicken for a hearty, savory lunch that hits over 40g of protein total.
The Jalapeño Cheddar Bagel
Fold chopped pickled jalapeños and shredded cheddar cheese directly into the dough during the kneading step. Top with more cheese before baking for a spicy, savory kick. This creates a gourmet healthy bagel recipe that tastes like it came from a bakery.
The Pizza Bagel
Slice the baked bagel in half. Top with marinara sauce, mozzarella, and mini pepperoni. Air fry for 3 minutes until bubbly. It’s a high-protein version of the childhood classic.
Storage, Freezing, and Reheating Guide
Because these no yeast bagels have no preservatives, proper storage is key to keeping them fresh.
- Countertop: Store in an airtight container for up to 2 days. Because of the high moisture content from the cheese, they can mold faster than regular bread if left out too long.
- Fridge: Store in an airtight bag for up to 5-6 days. This is the safest bet for meal prep.
- Freezer: These freeze beautifully! Slice them before freezing so they are toaster-ready. Wrap them individually in plastic wrap or parchment and store in a freezer bag for up to 3 months.
- Reheating:
- From Fresh: Slice and toast in a toaster or air fry for 2 minutes.
- From Frozen: Pop the frozen slice directly into the toaster. You may need to toast it on a slightly lower setting for a longer time to ensure the center warms through before the outside burns.
Frequently Asked Questions
Are high-protein bagels good for you?
Absolutely. Unlike empty-calorie bakery bagels which offer little nutritional value, these provide essential amino acids, calcium, and fiber (if using whole wheat flour), making them a balanced meal component. They are a staple healthy bagel recipe for anyone tracking macros.
What is the highest protein breakfast item?
While eggs are the gold standard, adding these high protein bagels to your rotation gives you a carb-forward option that still helps you hit 30g of protein per meal, breaking up the monotony of egg scrambles.
Why are my bagels sticky?
Cottage cheese moisture varies by brand. If the dough sticks to your hands excessively, just add 1 extra tablespoon of flour at a time until it pulls away cleanly. Wetting your hands slightly with water or oil can also help with shaping without adding too much extra flour.
Can I make these vegan?
It is difficult because the cottage cheese is the primary structural component. You could try using a high-protein vegan yogurt (like soy or pea protein based) and self-rising flour, but the texture will be different.
Can I make this gluten-free?
Yes, but you must use a quality “Cup-for-Cup” Gluten Free flour blend that contains Xanthan gum. Almond flour will not work here as it lacks the starch structure needed to rise without yeast. This allows you to enjoy no yeast bagels even on a gluten-free diet.
Can I use oat flour?
Oat flour behaves differently than wheat flour. You can use it, but you will need to add baking powder and salt manually (since self-rising oat flour isn’t common) and likely use more flour to absorb the moisture. The texture will be denser and nuttier.
Conclusion
You never have to buy dry, preservative-filled bagels again. These High Protein Bagels are fresh, fluffy, and fit perfectly into a healthy lifestyle. Whether you need a quick breakfast or a sturdy lunch vehicle, this recipe delivers on flavor and nutrition.

Looking for another savory bake? Try my Blueberry Cottage Cheese Breakfast Bake for a sweeter morning option that feeds a crowd.
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